Software

Software Site-Licensed by Swain | Software on Swain PCs | Other Software at Stanford | Chemistry Software on the Web | Related Links

Software Site-Licensed by Swain

We have a campus-wide site license to the products below. Access for all of these products is limited to current Stanford students, faculty, and staff. For license key or password information, please contact Grace Baysinger (graceb@stanford.edu).

Mac and PC users can access software on this page using a web browser and the Citrix plugin via CDSERVER. Authenticate as an explicit user and choose the Chemistry Folder. For more detailed instructions, please see Swain’s Off-Campus Access page.

• ACD/CNMR Predictor, HNMR Predictor, NMR Processor, Name & PhysChem Suite v.12 (PC Only)
  • Download ACD software
  • About:
    • CNMR Predictor
    • HNMR Predictor
    • NMR Processor (includes both 1D and 2D)
    • Name
    • PhysChem Suite
    • About all ACD products
  • Resources:
    • Advanced Chemistry Development for Academia
    • Application Notes
    • Demo (how-to) Movies
    • Ryan’s Blog on NMR Software
    • Technical Notes
   
• AutoNom (Automatic Nomenclature)
  • Download: AutoNom PC (7.3 MB) or AutoNom Mac (27 MB)
• Cambridge Structural Database (Mac, PC, Unix-Linux)

  The world repository of small molecule crystal structures.

  Download SuperStar

  • SuperStar PC (146 MB)
  • SuperStar Mac (45 MB)
• ChemBioOffice
• Chime Pro
  • Download: ChimePro PC (2.3 MB) or ChimePro Mac (1.6 MB)
  • Newer version available from: MDL DiscoveryGate
• Crossfire
• DIADEM (PC only)

  DIADEM is a convenient interface to the DIPPR^® 801 Database that enhances one’s ability to view, calculate, plot and compare the thermophysical properties in the database.

  • Download DIADEM (82 MB)
  • About DIADEM
• Polymath — Educational Version (PC only)

  Numerical solutions for scientific and engineering mathematical problems.

  • Download Polymath
  • About Polymath — Educational Version
  • About Polymath
• PyMol — Molecular Visualization System (PC, Mac, Linux)
  • Download PyMol
  • About PyMol
• SciFinder Scholar

Software on Swain PCs

Swain Library has 16 computers, two black-and-white printers, one color printer, and one scanner. Please read the Stanford and Swain computer use policies before using these computers.

Other Software at Stanford

• Gaussian
• QMForge: analyzes the results of quantum chemical calculations
• PyDespike: removes artificial peaks due to background fluctuations in Raman data
• Software at Stanford: software available for use or purchase on campus
• Software in Public Computer Clusters and Residential Computing

Chemistry Software on the Web

• Chemists’ and Chemical Engineers’ Toolbox
• CEP Software Directory (Searchable database produced by AIChE)
• ChemApp© light
• Chemical Kinetics Simulator (IBM)
• Chemistry Software dot com
• Computational Chemistry Software packages at NCSA
• CPC Program Library: Computer Programs in Physics and Physical Chemistry
• Cranium Lite for Physical Properties (for pure compounds and mixtures)
• Crystallography Source Code Museum
• CyclePad (construct and analyze thermodynamic cycles)
• Directories of Chemistry Software
• Download.com
• Evaluation of Reference Management Software
• IUCr Commission on Crystallographic Computing — Software Links
• Links for Chemists (Univ. Liverpool) (See Chemistry Software section)
• Linux4Chemistry
• Molecular Visualization Tools and Sites
• NHSE: National High-Performance Software Exchange
• NetSci’s Lists of Computational Chemistry Software
• NIH Center for Molecular Modeling
• Open Directory Project — Chemistry and Chemical Engineering Software
• Physics Academic Software
• Rolf Claessen’s Chemistry Index — Software
• Sheffield ChemDex Chemistry Software and Software Archives
• Software and Other Tools for Writing Assistance
• SINCRIS Software Database for Crystallography
• Some Starting links to Protein Crystallography Software/Macromolecular Crystallographic Software
• StatCodes: On-line Statistical Software for Astronomy and Physical Sciences
• Thermodynamic and Transport Properties of Water and Steam
• Thermodynamics MathCAD Files
• Top 500 Supercomputer Sites
• Water and Carbon Dioxide Phase Diagrams
• Water Mollier Diagram

Related Links

Computer Use Policies

• Swain Library Computer Use Guidelines
• Academic Computing and Residential Computing
• Computing Policies at Stanford University
• Leland Systems Usage Policies

Services and Support

• Academic Computing Computer Clusters and Public Computer Clusters
• Academic Computing
• Computing and Communication at Stanford
• Network Connections
• Remote Access to Library Resources
• Ergonomics Home Page

Publications

• Speaking of Computers (quarterly newsletter)
• Academic Computing > Publications and Documents
• Help SU Self-Help Guides