Library resources for researchers using mass spectrometry.
Table of Contents
New Stanford theses using mass spectrometry
New library materials on mass spectrometry
Mass spectrometry subjects in SearchWorks
narrower term: Accelerator mass spectrometry
narrower term: Chemical ionization mass spectrometry
narrower term: Electrospray ionization mass spectrometry
narrower term: Field desorption mass spectrometry
narrower term: Field ionization mass spectrometry
narrower term: Inductively coupled plasma mass spectrometry
narrower term: Ion cyclotron resonance spectrometry
narrower term: Matrix-assisted laser desorption-ionization
narrower term: Molecular spectra
narrower term: Secondary ion mass spectrometry
narrower term: Tandem mass spectrometry
narrower term: Time-of-flight mass spectrometry
Databases with spectral peak searching
Please also see Databases section of this guide to use mass spec databases.
- Online capillary zone electrophoresis negative electron transfer dissociation tandem mass spectrometry of glycosaminoglycan mixtures
- Characterization of collision-induced dissociation of deprotonated peptides of 4–16 amino acids using high-resolution mass spectrometry
- Proteome dynamics from heavy water metabolic labeling and peptide tandem mass spectrometry
- Comparison of performances of Principal Component Analysis (PCA) and Factor Analysis (FA) methods on the identification of cancerous and healthy colon tissues
- <div>Sensitive β-substituted aliphatic Ile/Val-Xxx and aromatic Phe/Tyr/His-Xxx residues to form [<em>a</em>]<sup>+</sup> ions in high energy CID of peptides</div>
- Mass Accuracy Check Using Common Background Peaks for Improving Metabolome Data Quality in Chemical Isotope Labeling LC-MS
- Topological Characterization of Coordination-Driven Self-assembly Complexes: Applications of Ion Mobility-Mass Spectrometry
- UV–Vis Photodissociation Action Spectroscopy on Thermo LTQ-XL ETD and Bruker amaZon Ion Trap Mass Spectrometers: a Practical Guide
- Citrulline Effect Is a Characteristic Feature of Deiminated Peptides in Tandem Mass Spectrometry
- Quantitation of Super Basic Peptides in Biological Matrices by a Generic Perfluoropentanoic Acid-Based Liquid Chromatography–Mass Spectrometry Method
- Paper Spray Mass Spectrometry: A New Drug Checking Tool for Harm Reduction in the Opioid Overdose Crisis
- Formation and Hydrolysis of Gas‐phase [UO2(R)]+: R=CH3, CH2CH3, CH=CH2 and C6H5
- Vibrating tip spray ionization mass spectrometry for direct sample analysis
- A recommended and verified procedure for in situ tryptic digestion of formalin‐fixed paraffin‐embedded tissues for analysis by matrix‐assisted laser desorption/ionization imaging mass spectrometry
- Positive and negative ions of the amino acid histidine formed in low‐energy electron collisions
- Novel applications of mass spectrometry‐based metabolomics in herbal medicines and its active ingredients: Current evidence
- Mass spectrometry strategies to unveil modified aminophospholipids of biological interest
- Global and site‐specific analysis of protein glycosylation in complex biological systems with Mass Spectrometry
- Proteome analysis of tissues by mass spectrometry
- Issue Information ‐ ToC
- Cell tracking of chromium‐labeled mesenchymal stem cells using laser ablation inductively coupled plasma imaging mass spectrometry
- An automated, laser‐based measurement system for nitrous oxide isotope and isotopomer ratios at nanomolar levels
- Simultaneous total analysis of core and polar membrane lipids in archaea by high‐performance liquid chromatography/high‐resolution mass spectrometry coupled with heated electrospray ionization
- High‐precision in situ silicon isotopic analyses by multi‐collector secondary ion mass spectrometry in olivine and low‐calcium pyroxene
- Ultra‐fast retroactive processing of liquid chromatography high‐resolution full‐scan Orbitrap mass spectrometry data in anti‐doping screening of human urine
Protocols & methods
Mass spectrometry > methods
Stanford's access to Mnova software
We have a campus-wide site license to MNova software that includes many of their plugins. If you have questions or need help, please contact Grace Baysinger. We renewed our license agreement which is valid through 2/14/2020.
License keys: The 2019 license keys are available to current students, faculty, and staff at Stanford. To get the license keys, please send a request to Grace Baysinger, Aparna Sharma, or Cristina Flores-Herrera using your @Stanford email address. Please also include your Stanford ID number in the request.
Note: to activate the software you must be on campus or connected via VPN. Please also note that the software "checks-in" with the license key server every 90 days. If your license key is not being recognized, try connecting to the campus network using VPN to see if this fixes the problem. If the problem still persists, please contact Grace Baysinger.
MNova app for tablets is also available for all current students, faculty, and staff at Stanford. After filling out this form, you will receive a confirmation email with further instructions on how to get started.
Training and support: Please see getting started resources, manuals and webinars plus Mestrelab's YouTube Channel to learn more about using Mnova. There are also three presentations in Stanford's Box (document storage space):
Download software and plugins
MestReNova or Mnova is a multipage, multivendor, multitechnique, and multiplatform analytical chemistry software suite designed as a container for using Mnova plugins. The NMR, MS, NMRP, Verify, and DB client plugins are integrated into Mnova so they don't need to be installed separately. You just need to activate them using the license keys. Be sure to check out what's new in Mnova.
Please note: to activate the software you must be on campus or connected via VPN.
||Mac, Windows, & Linux Versions. Software includes NMR, MS, NMRP, Verify, and DB client plugins.||Download Mnova|
|NMR plugin||NMR processing, analysis, simulation and reporting at your fingertips.||in Mnova|
|MS plugin||Processing & analyzing LC/GC/MS data made simple.||in Mnova|
|NMRP plugin||Prediction of NMR spectra from molecular structure; allows auto-assignments if combined with Mnova NMR.||in Mnova|
|Verify plugin||Automatic Structure Verification that really works. It works in combination with Mnova NMR ( or Mnova MS) and NMRPredict.||in Mnova|
|qNMR plugin||Arrive at optimal concentration or purity values.||Download qNMR|
|RM plugin||Simple, facilitated extraction of spectroscopic and chemical kinetic concentration data to help analyze reaction monitoring data.||Download RM|
|DB client plugin||A new concept for the shared storage of molecules, NMR and LC/GC/MS analytical data and other Mnova objects.||in Mnova|
Download Mnova DB server plugin
Mnova DB is an effective, fully integrated, multiplatform environment for the storage, indexing and searching of analytical chemistry data (NMR, LC/GC/MS and molecular structures). While the client side remains the same and integrated in Mnova, there are three versions of the DB Server plugin. Select the one that best fits your needs.
||Description||Windows Download Options (.exe installer)
||Mac & Linux Download Options (.jar installer)
||It is a solution for individual users. Runs only on SQLite and accepts only Mnova connections from the local computer.||version 1.8.2 MyData (Win)||version 1.8.2 MyData (Mac/Linux)|
||Runs only on SQLite and accepts connections from anywhere.||version 1.8.2 DB Group (Win)||version 1.8.2 DB Group (Mac/Linux)|
||Runs on any DB backend and accept connections from anywhere.||version 1.8.2 DB Enterprise (Win)||version 1.8.2 DB Enterprise (Mac/Linux)|
Site-licensed by Science Library
The Robin Li and Melissa Ma Science Library has purchased campus-wide site licenses for several products. Access to all of these products is limited to current Stanford students, faculty, and staff.