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Amy E. Hodge

Science Data Librarian

(650) 556-5194

I consult with all members of the Stanford scientific research community on research data management and data sharing. In particular, I assist members of the Stanford community with the preservation of research data and other research products in the Stanford Digital Repository and providing DOI services to the campus. I am actively involved with the Carpentries non-profit organization as a member of the Executive Council, a certified instructor trainer, a certified instructor, and the point person for Stanford Libraries' membership with the organization. Visit the Data Management Services web site to find out more.

Prior to joining Stanford Libraries, Amy worked on scientific databases in the biotech and biofuels industries, developing methods for collecting and synthesizing sophisticated information into easy-to-understand formats. Amy has a PhD in Molecular Biophysics and Biochemistry from Yale University, where she studied cell cycle regulation in the yeast Saccharomyces cerevisiae.


ORCID iD iconorcid.org/0000-0002-5902-3077

Pronouns: she/her/hers

Amy E. Hodge

Science Data Librarian

I consult with all members of the Stanford scientific research community on research data management and data sharing. In particular, I assist members of the Stanford community with the preservation of research data and other research products in the Stanford Digital Repository and providing DOI services to the campus. I am actively involved with the Carpentries non-profit organization as a member of the Executive Council, a certified instructor trainer, a certified instructor, and the point person for Stanford Libraries' membership with the organization. Visit the Data Management Services web site to find out more.

Prior to joining Stanford Libraries, Amy worked on scientific databases in the biotech and biofuels industries, developing methods for collecting and synthesizing sophisticated information into easy-to-understand formats. Amy has a PhD in Molecular Biophysics and Biochemistry from Yale University, where she studied cell cycle regulation in the yeast Saccharomyces cerevisiae.


ORCID iD iconorcid.org/0000-0002-5902-3077

Pronouns: she/her/hers

Education 

  • Ph.D., Molecular Biophysics and Biochemistry, Yale University
  • M.Phil., Molecular Biophysics and Biochemistry, Yale University
  • B.S., Biochemistry and Molecular Biology, Centre College of Kentucky

Professional activities 

Elected Member and Past Chair of the Carpentries Executive Council

Member, DataCite Community Engagement Steering Group

Member, PLOS Data Guidelines Board

Certified Carpentries Instructor Trainer and Carpentries Instructor

Invited member of DataONE (Data Observation Network for Earth) Community Engagement and Outreach Working Group, 2014.

Invited participant in NSF-sponsored iNeuro (information-neuroscience) workshop, November 2014.

"Salmon Data on the Hook: Preserving Scientific Data for the Future." Presentation with Julie Sweetkind-Singer at USGS Western Region Colloquium, Menlo Park, CA, 2014.

"The Deposit-a-Thon: A practical approach to staff training." Presentation at RDAP14 Summit, San Diego, CA, 2014.

"PharmGKB: Generating Knowledge to Catalyze Pharmacogenomic Research." Speaker, Generation Scotland Symposium on Pharmacogenetics, 2006. 

"Management of Pharmacogenomic Information." Guest Lecturer, University of San Francisco, 2006. 

Selected Publications 

Soyka H, Budden A, Hutchison V, Bloom D, Duckles J, Hodge A, Mayernik MS, Poisot T, Rauch S, Steinhart G, Wasser L, Whitmire AL, Wright S. (2017). Using Peer Review to Support Development of Community Resources for Research Data Management. Journal of eScience Librarianship 2017;6(2): e1114. DOI:10.7191/jeslib.2017.1114

Johnston, Lisa (editor). (2017) Making the Case for Institutional Data Repositories: Curating Research Data, Volume 2. Book chapter. ISBN: 9780838988589

Hodge, Amy E, Altman, Russ, and Klein, Teri (2007) "The PharmGKB: Integration, Aggregation, and Annotation of Pharmacogenomic Data and Knowledge." Clinical Pharmacology and Therapeutics, 81(1):21-24. DOI:10.1038/sj.clpt.6100048

Hodge, Amy E., Mendenhall, Michael D. (1999) “The cyclin-dependent kinase inhibitory domain of the yeast Sic1 protein is contained within the C-terminal 70 amino acids.” Molecular and General Genetics, 262(1):55-64. DOI:10.1007/s004380051059

Mendenhall, Michael D, Hodge, Amy E (1998) “Regulation of Cdc28 cyclin-dependent protein kinase activity during the cell cycle of the yeast Saccharomyces cerevisiae.” Microbiology and Molecular Biology Reviews, 62:1191-1243. DOI:10.1128/MMBR.62.4.1191-1243.1998

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